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Old 12-15-2010, 03:48 PM
Michael Schwendt
 
Default sage

On Wed, 15 Dec 2010 09:27:06 -0700 (GMT-07:00), James wrote:

> Patrick Dupre <pd520@york.ac.uk> wrote:
> >
> >Hello,
> >
> >Can some body help on sage ?
> >I cannot subscribe to the list !
> >
> >I installed:
> >sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma
> >
> >on a fedora 13 x86_64 machine and I get:
> >ImportError: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.14' not found
>
> What version of glibc do you have installed and do you have the development package for glibc installed at all?
>
> It appears that sage is looking for a specific version of glibc.

Take a close look at the error message. It refers to _libstdc++.so.6_
and CXX. Package "libstdc++ is needed", the C++ Standard Library.
Latest for F-13 does not provide the GLIBCXX_3.4.14 version, however:
http://koji.fedoraproject.org/koji/rpminfo?rpmID=2256490

Fedora 14, on the contrary, does (here querying RPM on i686, could have
used repoquery instead):

$ rpm -q --whatprovides 'libstdc++.so.6(GLIBCXX_3.4.14)'
libstdc++-4.5.1-4.fc14.i686
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Old 12-15-2010, 03:58 PM
Patrick Dupre
 
Default sage

thank,

I understand, but I am trying to install
sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma

which seems to indicates that this is the right version !!
How can I install GLIBCXX_3.4.14
without installing fedora 14 ?

I experienced network problems with fedora 14.



On Wed, 15 Dec 2010 09:27:06 -0700 (GMT-07:00), James wrote:


Patrick Dupre <pd520@york.ac.uk> wrote:


Hello,

Can some body help on sage ?
I cannot subscribe to the list !

I installed:
sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma

on a fedora 13 x86_64 machine and I get:
ImportError: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.14' not found


What version of glibc do you have installed and do you have the development package for glibc installed at all?

It appears that sage is looking for a specific version of glibc.


Take a close look at the error message. It refers to _libstdc++.so.6_
and CXX. Package "libstdc++ is needed", the C++ Standard Library.
Latest for F-13 does not provide the GLIBCXX_3.4.14 version, however:
http://koji.fedoraproject.org/koji/rpminfo?rpmID=2256490

Fedora 14, on the contrary, does (here querying RPM on i686, could have
used repoquery instead):

$ rpm -q --whatprovides 'libstdc++.so.6(GLIBCXX_3.4.14)'
libstdc++-4.5.1-4.fc14.i686



--
---
================================================== ========================
Patrick DUPRÉ | |
Department of Chemistry | | Phone: (44)-(0)-1904-434384
The University of York | | Fax: (44)-(0)-1904-432516
Heslington | |
York YO10 5DD United Kingdom | | email: patrick.dupre@york.ac.uk
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Old 12-15-2010, 04:06 PM
Andrew Haley
 
Default sage

On 12/15/2010 04:58 PM, Patrick Dupre wrote:

> I understand, but I am trying to install
> sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma
>
> which seems to indicates that this is the right version !!
> How can I install GLIBCXX_3.4.14
> without installing fedora 14 ?
>
> I experienced network problems with fedora 14.

You need to get a version of sage that is correct for Fedora 13.
This version is not correct.

I suppose if you were feeling really brave you could build it yourself
from the F14 source RPM, but I wouldn't recommend it.

Andrew.
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Old 12-15-2010, 04:13 PM
Patrick Dupre
 
Default sage

On Wed, 15 Dec 2010, Andrew Haley wrote:


On 12/15/2010 04:58 PM, Patrick Dupre wrote:


I understand, but I am trying to install
sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma

which seems to indicates that this is the right version !!
How can I install GLIBCXX_3.4.14
without installing fedora 14 ?

I experienced network problems with fedora 14.


You need to get a version of sage that is correct for Fedora 13.
This version is not correct.

I suppose if you were feeling really brave you could build it yourself
from the F14 source RPM, but I wouldn't recommend it.


This is what I though.
I downloaded gcc-4.5.1-4.fc14.src.rpm
and planed to compile it.
Will it be a problem to isntall it ?

Can I not find a gcc-4.5.1-4.fc13.src.rpm ?

Thank.

--
---
================================================== ========================
Patrick DUPRÉ | |
Department of Chemistry | | Phone: (44)-(0)-1904-434384
The University of York | | Fax: (44)-(0)-1904-432516
Heslington | |
York YO10 5DD United Kingdom | | email: patrick.dupre@york.ac.uk
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Old 12-15-2010, 05:18 PM
Robert Myers
 
Default sage

On Wed, Dec 15, 2010 at 12:13 PM, Patrick Dupre <pd520@york.ac.uk> wrote:
> On Wed, 15 Dec 2010, Andrew Haley wrote:
>
>> On 12/15/2010 04:58 PM, Patrick Dupre wrote:
>>
>>> I understand, but I am trying to install
>>> sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma
>>>
>>> which seems to indicates that this is the right version !!
>>> How can I install GLIBCXX_3.4.14
>>> without installing fedora 14 ?
>>>
>>> I experienced network problems with fedora 14.
>>
>> You need to get a version of sage that is correct for Fedora 13.
>> This version is not correct.
>>
>> I suppose if you were feeling really brave you could build it yourself
>> from the F14 source RPM, but I wouldn't recommend it.
>>
> This is what I though.
> I downloaded gcc-4.5.1-4.fc14.src.rpm
> and planed to compile it.
> Will it be a problem to isntall it ?
>
> Can I not find a gcc-4.5.1-4.fc13.src.rpm ?
>
You can install sage from the distribution repository on Ubuntu. When
I contemplated all the possible ways of dealing with an unsupported
but complicated package like sage, I decided that it was simpler just
to install a virtual instance of Ubuntu.

Robert.
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Old 12-15-2010, 06:30 PM
Andrew Haley
 
Default sage

On 12/15/2010 05:13 PM, Patrick Dupre wrote:
> On Wed, 15 Dec 2010, Andrew Haley wrote:
>
>> On 12/15/2010 04:58 PM, Patrick Dupre wrote:
>>
>>> I understand, but I am trying to install
>>> sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma
>>>
>>> which seems to indicates that this is the right version !!
>>> How can I install GLIBCXX_3.4.14
>>> without installing fedora 14 ?
>>>
>>> I experienced network problems with fedora 14.
>>
>> You need to get a version of sage that is correct for Fedora 13.
>> This version is not correct.
>>
>> I suppose if you were feeling really brave you could build it yourself
>> from the F14 source RPM, but I wouldn't recommend it.
>>
> This is what I though.
> I downloaded gcc-4.5.1-4.fc14.src.rpm
> and planed to compile it.
> Will it be a problem to isntall it ?

If you're not an expert you may have trouble, yes, although it is
backwards compatible. That's why I don't recommend it.

> Can I not find a gcc-4.5.1-4.fc13.src.rpm ?

I don't know that any such thing ever existed. It would be interesting
to try to discover what sage used. My bet is that they installed something
from rawhide by mistake and used that to build.

But really you're looking in the wrong place for a fix. They claim it's
the F13 version, but it isn't.

Andrew.
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Old 12-16-2010, 12:41 PM
Jon Ingason
 
Default sage

2010-12-15 18:13, Patrick Dupre skrev:
> On Wed, 15 Dec 2010, Andrew Haley wrote:
>
>> On 12/15/2010 04:58 PM, Patrick Dupre wrote:
>>
>>> I understand, but I am trying to install
>>> sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma
>>>
>>> which seems to indicates that this is the right version !!
>>> How can I install GLIBCXX_3.4.14
>>> without installing fedora 14 ?
>>>
>>> I experienced network problems with fedora 14.
>>
>> You need to get a version of sage that is correct for Fedora 13.
>> This version is not correct.
>>
>> I suppose if you were feeling really brave you could build it yourself
>> from the F14 source RPM, but I wouldn't recommend it.
>>
> This is what I though.
> I downloaded gcc-4.5.1-4.fc14.src.rpm
> and planed to compile it.
> Will it be a problem to isntall it ?
>
> Can I not find a gcc-4.5.1-4.fc13.src.rpm ?
>
> Thank.

I have F13:

$uname -svr
Linux 2.6.34.7-63.fc13.x86_64 #1 SMP Fri Dec 3 12:38:46 UTC 2010

And if I do following I get the answer you need:

$ yum search libstdc++
...
============================= Matchade: libstdc++
==============================
compat-libstdc++-296.i686 : Kompatibilitet med standard C++-bibliotek
2.96-RH.
compat-libstdc++-33.i686 : Standard C++-bibliotek i kompatibilitetsversion
compat-libstdc++-33.x86_64 : Standard C++-bibliotek i kompatibilitetsversion
libstdc++.i686 : GNU standard C++-bibliotek
libstdc++.x86_64 : GNU standard C++-bibliotek
libstdc++-devel.i686 : Huvudfiler och bibliotek för C++-utveckling
libstdc++-devel.x86_64 : Huvudfiler och bibliotek för C++-utveckling
libstdc++-docs.x86_64 : Documentation for the GNU standard C++ library

So you need just to install libstdc++.

>


--
Regards
Jon Ingason
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Old 12-16-2010, 01:11 PM
Patrick Dupre
 
Default sage

On Thu, 16 Dec 2010, Jon Ingason wrote:


2010-12-15 18:13, Patrick Dupre skrev:
On Wed, 15 Dec 2010, Andrew Haley wrote:


On 12/15/2010 04:58 PM, Patrick Dupre wrote:


I understand, but I am trying to install
sage-4.6-linux-64bit-fedora_release_13_goddard_-x86_64-Linux.tar.lzma

which seems to indicates that this is the right version !!
How can I install GLIBCXX_3.4.14
without installing fedora 14 ?

I experienced network problems with fedora 14.


You need to get a version of sage that is correct for Fedora 13.
This version is not correct.

I suppose if you were feeling really brave you could build it yourself
from the F14 source RPM, but I wouldn't recommend it.


This is what I though.
I downloaded gcc-4.5.1-4.fc14.src.rpm
and planed to compile it.
Will it be a problem to isntall it ?

Can I not find a gcc-4.5.1-4.fc13.src.rpm ?

Thank.


I have F13:

$uname -svr
Linux 2.6.34.7-63.fc13.x86_64 #1 SMP Fri Dec 3 12:38:46 UTC 2010

And if I do following I get the answer you need:

$ yum search libstdc++
...
============================= Matchade: libstdc++
==============================
compat-libstdc++-296.i686 : Kompatibilitet med standard C++-bibliotek
2.96-RH.

compat-libstdc++-33.i686 : Standard C++-bibliotek i kompatibilitetsversion
compat-libstdc++-33.x86_64 : Standard C++-bibliotek i kompatibilitetsversion
libstdc++.i686 : GNU standard C++-bibliotek
libstdc++.x86_64 : GNU standard C++-bibliotek
libstdc++-devel.i686 : Huvudfiler och bibliotek för C++-utveckling
libstdc++-devel.x86_64 : Huvudfiler och bibliotek för C++-utveckling
libstdc++-docs.x86_64 : Documentation for the GNU standard C++ library

So you need just to install libstdc++.

Of ocurse libstdc++ is installed, but sage needs GLIBCXX_3.4.14
wil only GLIBCXX_3.4.13 is in fedora 13.

So I recompile sage ! just took hours !

--
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Jon Ingason
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--
---
================================================== ========================
Patrick DUPRÉ | |
Department of Chemistry | | Phone: (44)-(0)-1904-434384
The University of York | | Fax: (44)-(0)-1904-432516
Heslington | |
York YO10 5DD United Kingdom | | email: patrick.dupre@york.ac.uk
================================================== ========================--
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