Hi,

I'm packaging the Integrative Genomics Viewer for Debian, and it
depends on Colt, which is "a set of Open Source Libraries for High
Performance Scientific and Technical Computing in Java".
http://acs.lbl.gov/software/colt/

Would the Debian-Java packaging team be able to package this
dependency for me? It would be much appreciated.

Thanks,
Shaun


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Hi Shaun,

On Thu, Jun 17, 2010 at 8:04 PM, Shaun Jackman <sjackman@gmail.com> wrote:
> I'm packaging the Integrative Genomics Viewer for Debian, and it
> depends on Colt, which is "a set of Open Source Libraries for High
> Performance Scientific and Technical Computing in Java".
> http://acs.lbl.gov/software/colt/

nice

> Would the Debian-Java packaging team be able to package this
> dependency for me? It would be much appreciated.

I don't think so. But you are welcome to join the Java packaging team
and start packaging colt. I am sure there are people that can help you
if you have questions.

Cheers,
Torsten


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Hi Tony,

You have impeccable timing. I just packaged Colt (libcolt-java)
yesterday. The git repository is here:
git+ssh://alioth.debian.org/git/debian-med/igv.git
http://git.debian.org/?p=debian-med/colt.git

I'd appreciate any eyes that would like to look it over. I am a DD,
but thanks anyway for the sponsorship offer.

Colt includes some source files from a HEP AIDA implementation, which
are non-free (LGPL except military), although the rest of Colt is
DFSG. There's a free implementation of HEP AIDA, FreeHEP JAIDA, here:
http://java.freehep.org/jaida/

Other libfreehep-*-java packages are packaged for Debian, but not JAIDA.

Cheers,
Shaun

On 9 July 2010 22:25, tony mancill <tmancill@debian.org> wrote:
> Hello Shaun,
>
> I took a quick look at this library and believe it shouldn't be too
> tough. *Have you made any progress packaging it? *I could help with
> sponsoring.
>
> Cheers,
> Tony
>
> On 06/17/2010 11:04 AM, Shaun Jackman wrote:
>> Hi,
>>
>> I'm packaging the Integrative Genomics Viewer for Debian, and it
>> depends on Colt, which is "a set of Open Source Libraries for High
>> Performance Scientific and Technical Computing in Java".
>> http://acs.lbl.gov/software/colt/
>>
>> Would the Debian-Java packaging team be able to package this
>> dependency for me? It would be much appreciated.
>>
>> Thanks,
>> Shaun
>>
>>
>
>
>


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Hi,

I've uploaded colt (libcolt-java) to Debian. Thanks for your help,
Charles! I've pushed changes to the IGV git repository to depend on
libcolt-java.

Cheers,
Shaun

On 10 July 2010 11:28, Shaun Jackman <sjackman@gmail.com> wrote:
> Hi Tony,
>
> You have impeccable timing. I just packaged Colt (libcolt-java)
> yesterday. The git repository is here:
> git+ssh://alioth.debian.org/git/debian-med/igv.git
> http://git.debian.org/?p=debian-med/colt.git
>
> I'd appreciate any eyes that would like to look it over. I am a DD,
> but thanks anyway for the sponsorship offer.
>
> Colt includes some source files from a HEP AIDA implementation, which
> are non-free (LGPL except military), although the rest of Colt is
> DFSG. There's a free implementation of HEP AIDA, FreeHEP JAIDA, here:
> http://java.freehep.org/jaida/
>
> Other libfreehep-*-java packages are packaged for Debian, but not JAIDA.
>
> Cheers,
> Shaun
>
> On 9 July 2010 22:25, tony mancill <tmancill@debian.org> wrote:
>> Hello Shaun,
>>
>> I took a quick look at this library and believe it shouldn't be too
>> tough. *Have you made any progress packaging it? *I could help with
>> sponsoring.
>>
>> Cheers,
>> Tony
>>
>> On 06/17/2010 11:04 AM, Shaun Jackman wrote:
>>> Hi,
>>>
>>> I'm packaging the Integrative Genomics Viewer for Debian, and it
>>> depends on Colt, which is "a set of Open Source Libraries for High
>>> Performance Scientific and Technical Computing in Java".
>>> http://acs.lbl.gov/software/colt/
>>>
>>> Would the Debian-Java packaging team be able to package this
>>> dependency for me? It would be much appreciated.
>>>
>>> Thanks,
>>> Shaun
>>>
>>>
>>
>>
>>
>


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