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-   -   Bug#680539: ITP: hmmer2 -- profile hidden Markov models for protein sequence analysis (version 2) (http://www.linux-archive.org/debian-development/680796-bug-680539-itp-hmmer2-profile-hidden-markov-models-protein-sequence-analysis-version-2-a.html)

Joachim Wiedorn 07-06-2012 05:43 PM

Bug#680539: ITP: hmmer2 -- profile hidden Markov models for protein sequence analysis (version 2)
 
Hello,

Laszlo Kajan wrote on 2012-07-06 18:47:

> HMMER is an implementation of profile hidden Markov model methods for
> sensitive searches of biological sequence databases using multiple sequence
> alignments as queries.

Which software/packages do you use together with this package?

Is there a way to use this package directly together with some speech
recognition software: cmusphinx or simon/julius?

---
Have a nice day.

Joachim (Germany)


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Bastian Blank 07-06-2012 07:04 PM

Bug#680539: ITP: hmmer2 -- profile hidden Markov models for protein sequence analysis (version 2)
 
On Fri, Jul 06, 2012 at 07:43:41PM +0200, Joachim Wiedorn wrote:
> Laszlo Kajan wrote on 2012-07-06 18:47:
> > HMMER is an implementation of profile hidden Markov model methods for
> > sensitive searches of biological sequence databases using multiple sequence
> > alignments as queries.
> Is there a way to use this package directly together with some speech
> recognition software: cmusphinx or simon/julius?

HMMER ist for protein and nucleotid data. Not natural text.

Bastian

--
I'm a soldier, not a diplomat. I can only tell the truth.
-- Kirk, "Errand of Mercy", stardate 3198.9


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