Bug#680233: ITP: lowcompseg -- identification and masking of segments of low compositional complexity in amino acid sequences
* Package name : seg
Version : 1994101801
Upstream Author : John Wootton <firstname.lastname@example.org> and Scott Federhen <email@example.com>
* URL : ftp://ftp.ncbi.nih.gov/pub/seg/seg/README
* License : In public domain
Programming Lang: C
Description : identification and masking of segments of low compositional complexity in amino acid sequences
SEG is a program for identifying and masking segments of low compositional complexity in amino acid sequences.
seg divides sequences into contrasting segments of low-complexity and high-complexity. Low-complexity segments defined by the
algorithm represent "simple sequences" or "compositionally-biased regions".
This program is inappropriate for masking nucleotide sequences and, in fact, may strip some nucleotide ambiguity codes from nt. sequences as they are being read.
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