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Old 05-16-2012, 05:48 PM
Steffen Moeller
Default Bug#673182: ITP: pscan -- finds overrepresented transcription factor binding sites

Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <steffen_moeller@gmx.de>

* Package name : pscan
Version : 1.2.1
* URL :
* License : unclear
Programming Lang: C++
Description : finds overrepresented transcription factor binding sites

This packages takes a motif database of transcription factor binding sites
(TFBS) and expects a list of genes that are found co-regulated. It then points to
those TFBS that seem statistically most unlikely to be observed by chance.

The package already lives at
Vcs-Browser: http://svn.debian.org/viewvc/debian-med/trunk/packages/pscan



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Archive: 20120516174846.21084.14291.reportbug@master.dermac loud.uni-luebeck.de">http://lists.debian.org/20120516174846.21084.14291.reportbug@master.dermac loud.uni-luebeck.de

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