Linux Archive

Linux Archive (http://www.linux-archive.org/)
-   Debian Development (http://www.linux-archive.org/debian-development/)
-   -   Bug#452373: ITP: glam2 -- Gapped Local Alignment of Motifs (http://www.linux-archive.org/debian-development/2854-bug-452373-itp-glam2-gapped-local-alignment-motifs.html)

Charles Plessy 11-22-2007 09:47 AM

Bug#452373: ITP: glam2 -- Gapped Local Alignment of Motifs
 
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>

Package name : glam2
Version : 1023
Upstream Authors: Martin C Frith <martin@cbrc.jp>
Timothy L Bailey <t.bailey@imb.uq.edu.au>
URL : http://bioinformatics.org.au/glam2
License : Public domain
Programming Lang: C
Description : Gapped Local Alignment of Motifs

GLAM2 is a software package for finding motifs in sequences, typically
amino-acid or nucleotide sequences. A motif is a re-occurring sequence
pattern: typical examples are the TATA box and the CAAX prenylation
motif. The main innovation of GLAM2 is that it allows insertions and
deletions in motifs.

Packaging was started by Steffen Möller, and is almost finished. There
is a PDF file with no sources, but this time one of the authors is a
friend, so getting them will be piece of cake.

--
Charles Plessy
Debian-Med packaging team
Wakō, Saitama, Japan



--
To UNSUBSCRIBE, email to debian-devel-REQUEST@lists.debian.org
with a subject of "unsubscribe". Trouble? Contact listmaster@lists.debian.org


All times are GMT. The time now is 06:54 PM.

VBulletin, Copyright ©2000 - 2014, Jelsoft Enterprises Ltd.
Content Relevant URLs by vBSEO ©2007, Crawlability, Inc.